3ZME	Cell Cycle	date	Feb 07, 2013
title	Structure Of The P53 Core Domain Mutant Y220c Bound To The S Molecule Phikan7242
authors	A.C.Joerger, R.Wilcken
compound		source
Molecule: Cellular Tumor Antigen P53 Chain: A, B Fragment: Dna-Binding Domain, Residues 94-312 Synonym: Antigen Ny-Co-13,Phosphoprotein P53,Tumor Suppress Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Tp53, P53 Expression_system: Escherichia Coli Bl21 Expression_system_taxid: 511693
symmetry	Space Group: P 21 21 21	R_factor 0.155 R_Free 0.175
crystal cell	length a length b length c angle alpha angle beta angle gamma 65.138 71.023 105.324 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.35 Å
ligand	QC5, ZN	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	Small molecule induced reactivation of mutant p53 in cancer cells., Liu X, Wilcken R, Joerger AC, Chuckowree IS, Amin J, Spencer J, Fersht AR, Nucleic Acids Res. 2013 Apr 29. PMID:23630318

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (149 Kb) [Save to disk] Biological Unit Coordinates (3zme.pdb1.gz) 73 Kb Biological Unit Coordinates (3zme.pdb2.gz) 74 Kb LPC: Ligand-Protein Contacts for 3ZME CSU: Contacts of Structural Units for 3ZME Structure Factors (3825 Kb) Retrieve 3ZME in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3ZME from S2C, [Save to disk] Re-refined 3zme structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3ZME in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3ZME

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3ZME, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3zme_A] [3zme_B] [3zme] SWISS-PROT database: Domain organization of by SWISSPFAM

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