43C9	Immunoglobulin	date	Mar 10, 1999
title	Crystallographic Structure Of The Esterolytic And Amidolytic Antibody
authors	M.M.Thayer, E.D.Getzoff, V.A.Roberts
compound		source
Molecule: Protein (Immunoglobulin (Light Chain)) Chain: A, C, E, G Fragment: Fv Engineered: Yes		Organism_scientific: Mus Musculus Organism_common: House Mouse Organism_taxid: 10090 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_cell_line: Bl21(De3)
Molecule: Protein (Immunoglobulin (Heavy Chain)) Chain: B, D, F, H Fragment: Fv Engineered: Yes		Organism_scientific: Mus Musculus Organism_common: House Mouse Organism_taxid: 10090 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_cell_line: Bl21(De3)
symmetry	Space Group: C 2 2 21	R_factor 0.210 R_Free 0.265
crystal cell	length a length b length c angle alpha angle beta angle gamma 104.130 112.660 245.120 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.20 Å
related structures	by homologous chain: 1OAK, 1YEE
Primary reference	Structural basis for amide hydrolysis catalyzed by the 43C9 antibody., Thayer MM, Olender EH, Arvai AS, Koike CK, Canestrelli IL, Stewart JD, Benkovic SJ, Getzoff ED, Roberts VA, J Mol Biol 1999 Aug 13;291(2):329-45. PMID:10438624

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (150 Kb) [Save to disk] Biological Unit Coordinates (43c9.pdb1.gz) 39 Kb Biological Unit Coordinates (43c9.pdb2.gz) 39 Kb Biological Unit Coordinates (43c9.pdb3.gz) 39 Kb Biological Unit Coordinates (43c9.pdb4.gz) 39 Kb CSU: Contacts of Structural Units for 43C9 Likely Quarternary Molecular Structure file(s) for 43C9 Structure Factors (401 Kb) Retrieve 43C9 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 43C9 from S2C, [Save to disk] Re-refined 43c9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 43C9 in 3D

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Visual 3D analysis of 43C9

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 43C9, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d43c9a_, region A [Jmol] [rasmolscript] [script source]     - Domain d43c9b_, region B [Jmol] [rasmolscript] [script source]     - Domain d43c9c_, region C [Jmol] [rasmolscript] [script source]     - Domain d43c9d_, region D [Jmol] [rasmolscript] [script source]     - Domain d43c9e_, region E [Jmol] [rasmolscript] [script source]     - Domain d43c9f_, region F [Jmol] [rasmolscript] [script source]     - Domain d43c9g_, region G [Jmol] [rasmolscript] [script source]     - Domain d43c9h_, region H [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [43c9] [43c9_A] [43c9_E] [43c9_D] [43c9_C] [43c9_G] [43c9_B] [43c9_H] [43c9_F] SWISS-PROT database: [P01820] Domain organization of [HVM44_MOUSE] by SWISSPFAM Domain found in 43C9: [IGv ] by SMART

Other resources with information on 43C9

Community annotation for 43C9 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Domain movements in 43C9 from the Database of Macromolecular Movements. Images from IMB Jena Image Library of Biological Macromolecules.

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