4FXC Electron Transport date Apr 25, 1995
title Tertiary Structure Of [2fe-2s] Ferredoxin From Spirulina Platensis Refined At 2.5 Angstroms Resolution: Structural Comparisons Of Plant-Type Ferredoxins And An Electrostatic Potential Analysis
authors K.Fukuyama, T.Tsukihara
compound source
Molecule: Ferredoxin
Chain: A
 Organism_scientific: Arthrospira Platensis
Organism_taxid: 118562
symmetry Space Group: C 2 2 21
R_factor 0.199 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
62.320 28.510 108.080 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.50 Å
ligand FES enzyme
note 4FXC supersedes 3FXC, 1FXC
related structures by homologous chain: 1FXA, 1GAQ
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceTertiary structure of [2Fe-2S] ferredoxin from Spirulina platensis refined at 2.5 A resolution: structural comparisons of plant-type ferredoxins and an electrostatic potential analysis., Fukuyama K, Ueki N, Nakamura H, Tsukihara T, Matsubara H, J Biochem (Tokyo) 1995 May;117(5):1017-23. PMID:8586613
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (20 Kb) [Save to disk]
  • Biological Unit Coordinates (4fxc.pdb1.gz) 17 Kb
  • LPC: Ligand-Protein Contacts for 4FXC
  • CSU: Contacts of Structural Units for 4FXC
  • Likely Quarternary Molecular Structure file(s) for 4FXC
  • Retrieve 4FXC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4FXC from S2C, [Save to disk]
    • View 4FXC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4FXC
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4FXC, from MSDmotif at EBI
  • Genome occurence of 4FXC's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d4fxc__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4fxc] [4fxc_A]
  • SWISS-PROT database: [P00246]
  • Domain organization of [FER_SPIPL] by SWISSPFAM
    • Other resources with information on 4FXC
  • Community annotation for 4FXC at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Domain movements in 4FXC from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science