4ANV Transferase date Mar 22, 2012
title Complexes Of Pi3kgamma With Isoform Selective Inhibitors.
authors P.G.Foster, J.C.Lougheed
compound source
Molecule: Phosphatidylinositol-4,5-Bisphosphate 3-Kinase Ca Subunit Gamma Isoform;
Chain: A
Fragment: Catalytic Subunit Gamma, Residues 144-1102
Synonym: Pi3-Kinase Subunit Gamma, Pi3k-Gamma, Pi3kgamma, Ptdins-3-Kinase Subunit Gamma, Phosphatidylinositol-4\,5-Bisphosphate 3-Kinase 110 Kda Ca Subunit Gamma, Ptdins-3-Kinase Subunit P110-Gamma, P110gam Phosphoinositide-3-Kinase Catalytic Gamma Polypeptide, Serinethreonine Protein Kinase Pik3cg, P120-Pi3k;
Ec: 2.7.1.137, 2.7.1.153, 2.7.11.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
Expression_system_cell_line: Sf9
Expression_system_vector_type: Baculovirus
symmetry Space Group: C 1 2 1
R_factor 0.24021 R_Free 0.29737
crystal
cell
length a length b length c angle alpha angle beta angle gamma
144.337 68.729 106.773 90.00 94.91 90.00
method X-Ray Diffractionresolution 2.13 Å
ligand 751, SO4 BindingDB enzyme Transferase E.C.2.7.1.137 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceDiscovery of a Novel Series of Potent and Orally Bioavailable Phosphoinositide 3-Kinase gamma Inhibitors., Leahy JW, Buhr CA, Johnson HW, Kim BG, Baik T, Cannoy J, Forsyth TP, Jeong JW, Lee MS, Ma S, Noson K, Wang L, Williams M, Nuss JM, Brooks E, Foster P, Goon L, Heald N, Holst C, Jaeger C, Lam S, Lougheed J, Nguyen L, Plonowski A, Song J, Stout T, Wu X, Yakes MF, Yu P, Zhang W, Lamb P, Raeber O, J Med Chem. 2012 May 17. PMID:22548342
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (153 Kb) [Save to disk]
  • Biological Unit Coordinates (4anv.pdb1.gz) 144 Kb
  • LPC: Ligand-Protein Contacts for 4ANV
  • CSU: Contacts of Structural Units for 4ANV
  • Structure Factors (777 Kb)
  • Retrieve 4ANV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4ANV from S2C, [Save to disk]
  • Re-refined 4anv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4ANV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4ANV
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4ANV, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4anv_A] [4anv]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4ANV: [PI3K_C2] [PI3K_rbd] [PI3Ka] [PI3Kc ] by SMART
  • Other resources with information on 4ANV
  • Community annotation for 4ANV at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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