4AP7	Transferase	date	Mar 30, 2012
title	Crystal Structure Of C-Met Kinase Domain In Complex With 4-( Fluorophenyl)-(1,2,4)Triazolo(4,3-B)(1,2,4)Triazin-3-Yl)Met
authors	M.Mctigue, J.Wickersham
compound		source
Molecule: Hepatocyte Growth Factor Receptor Chain: A Fragment: Tyrosine Kinase Domain, Unp Residues 1051-1348 Synonym: Hgf Receptor, Hgfsf Receptor, Proto-Oncogene C-Me Factor Receptor, Sf Receptor, Tyrosine-Protein Kinase Met; Ec: 2.7.10.1 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Spodoptera Frugiperda Expression_system_common: Fall Armyworm Expression_system_taxid: 7108 Expression_system_cell_line: Sf9 Expression_system_vector_type: Baculovirus Expression_system_plasmid: Pfastbac1
symmetry	Space Group: P 21 21 2	R_factor 0.191 R_Free 0.214
crystal cell	length a length b length c angle alpha angle beta angle gamma 76.708 93.387 46.370 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.80 Å
ligand	F47 BindingDB	enzyme	Transferase E.C.2.7.10.1 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Discovery of a Novel Class of Exquisitely Selective Mesenchymal-Epithelial Transition Factor (c-MET) Protein Kinase Inhibitors and Identification of the Clinical Candidate 2-(4-(1-(Quinolin-6-ylmethyl)-1H-[1,2,3]triazolo[4,5-b]pyrazin-6-yl)-1H-pyrazol-1 -yl)ethanol (PF-04217903) for the Treatment of Cancer., Cui JJ, McTigue M, Nambu M, Tran-Dube M, Pairish M, Shen H, Jia L, Cheng H, Hoffman J, Le P, Jalaie M, Goetz GH, Ryan K, Grodsky N, Deng YL, Parker M, Timofeevski S, Murray BW, Yamazaki S, Aguirre S, Li Q, Zou H, Christensen J, J Med Chem. 2012 Sep 10. PMID:22924734

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (59 Kb) [Save to disk] Biological Unit Coordinates (4ap7.pdb1.gz) 54 Kb LPC: Ligand-Protein Contacts for 4AP7 CSU: Contacts of Structural Units for 4AP7 Structure Factors (434 Kb) Retrieve 4AP7 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4AP7 from S2C, [Save to disk] Re-refined 4ap7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

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Visual 3D analysis of 4AP7

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4AP7, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4ap7] [4ap7_A] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 4AP7: [TyrKc ] by SMART

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