4B3A Transcription date Jul 23, 2012
title Tetracycline Repressor Class D Mutant H100a In Complex With Tetracycline
authors S.Eltschkner, S.Schindler, G.J.Palm, J.Schneider, W.Hinrichs
compound source
Molecule: Tetracycline Repressor Protein Class D
Chain: A
Fragment: Residues 2-208
Engineered: Yes
Mutation: Yes
Organism_scientific: Escherichia Coli
Organism_taxid: 562
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Rb791
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pwh1590 H100a
symmetry Space Group: I 41 2 2
R_factor 0.203 R_Free 0.250
crystal
cell
length a length b length c angle alpha angle beta angle gamma
67.537 67.537 179.859 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.70 Å
ligand CL, MG, TAC enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (77 Kb) [Save to disk]
  • Biological Unit Coordinates (4b3a.pdb1.gz) 141 Kb
  • LPC: Ligand-Protein Contacts for 4B3A
  • CSU: Contacts of Structural Units for 4B3A
  • Structure Factors (285 Kb)
  • Retrieve 4B3A in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4B3A from S2C, [Save to disk]
  • Re-refined 4b3a structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4B3A in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4B3A
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4B3A, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4b3a_A] [4b3a]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4B3A
  • Community annotation for 4B3A at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science