4BNT Oxidoreductase date May 17, 2013
title Crystal Structure Of 3-Oxoacyl-(Acyl-Carrier-Protein) Reduct From Pseudomonas Aeruginosa In Complex With 2-(Trifluoromet Benzimidazole At 2.3a Resolution
authors C.D.Cukier, R.Schnell, Y.Lindqvist, G.Schneider
compound source
Molecule: 3-Oxoacyl-[Acyl-Carrier-Protein] Reductase Fabg
Chain: A, B, C, D
Synonym: 3-Oxoacyl-Acyl-Carrier-Protein Reductase, 3-Ketoac Carrier Protein Reductase, Beta-Ketoacyl-Acyl Carrier Prote Reductase, Beta-Ketoacyl-Acp Reductase, 3-Oxoacyl-Acp Reduc
Ec: 1.1.1.100
Engineered: Yes
Organism_scientific: Pseudomonas Aeruginosa
Organism_taxid: 208964
Strain: Pao1
Atcc: 47085
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_vector: Pnic28-Bsa4
Expression_system_plasmid: Pnic-Pa2967
symmetry Space Group: P 21 21 21
R_factor 0.191 R_Free 0.236
crystal
cell
length a length b length c angle alpha angle beta angle gamma
54.180 109.152 145.194 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.30 Å
ligand 36E enzyme Oxidoreductase E.C.1.1.1.100 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceDiscovery of an allosteric inhibitor binding site in 3-oxo-acyl-ACP reductase from Pseudomonas aeruginosa., Cukier CD, Hope AG, Elamin AA, Moynie L, Schnell R, Schach S, Kneuper H, Singh M, Naismith JH, Lindqvist Y, Gray DW, Schneider G, ACS Chem Biol. 2013 Sep 9. PMID:24015914
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (282 Kb) [Save to disk]
  • Biological Unit Coordinates (4bnt.pdb1.gz) 275 Kb
  • LPC: Ligand-Protein Contacts for 4BNT
  • CSU: Contacts of Structural Units for 4BNT
  • Structure Factors (1521 Kb)
  • Retrieve 4BNT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4BNT from S2C, [Save to disk]
  • Re-refined 4bnt structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4BNT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4BNT
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4BNT, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4bnt_A] [4bnt_B] [4bnt_D] [4bnt] [4bnt_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4BNT
  • Community annotation for 4BNT at PDBWiki (http://pdbwiki.org)

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