4C00 Crystal structure of TamA from E. coli date
authors Gruss, F., Zaehringer, F., Jakob, R.P., Burmann, B.M., Hiller, S., Maier, T.
compound source
symmetry
R_factor
R_Free 0.2170
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.25
ligand ACT, CL, MC3 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe structural basis of autotransporter translocation by TamA., Gruss F, Zahringer F, Jakob RP, Burmann BM, Hiller S, Maier T, Nat Struct Mol Biol. 2013 Sep 22. doi: 10.1038/nsmb.2689. PMID:24056943
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (302 Kb) [Save to disk]
  • Biological Unit Coordinates (4c00.pdb1.gz) 290 Kb
  • LPC: Ligand-Protein Contacts for 4C00
  • CSU: Contacts of Structural Units for 4C00
  • Structure Factors (495 Kb)
  • Retrieve 4C00 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4C00 from S2C, [Save to disk]
  • Re-refined 4c00 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4C00 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4C00
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4C00, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4c00_A] [4c00]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4C00
  • Community annotation for 4C00 at PDBWiki (http://pdbwiki.org)

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