4CFN Structure-based design of C8-substituted O6-cyclohexylmethoxyguanine CDK1 and 2 inhibitors. date
authors Carbain, B., Paterson, D.J., Anscombe, E., Campbell, A., Cano, C., Echalier, A., Endicott, J., Golding, B.T., Haggerty, K., Hardcastle, I.R., Jewsbury, P., Newell, D.R., Noble, M.E.M., Roche, C., Wang, L.Z., Griffin, R.
compound source
symmetry
R_factor
R_Free 0.24087
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.20
ligand DTT, JYM, TPO enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, C


Primary reference8-Substituted O6-Cyclohexylmethylguanine CDK2 Inhibitors; Using Structure-Based Inhibitor Design to Optimise an Alternative Binding Mode., Carbain B, Paterson DJ, Anscombe E, Campbell-Dexter A, Cano C, Echalier A, Endicott J, Golding BT, Haggerty K, Hardcastle IR, Jewsbury PJ, Newell DR, Noble M, Roche C, Wang LZ, Griffin RJ, J Med Chem. 2013 Dec 4. PMID:24304238
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (379 Kb) [Save to disk]
  • Biological Unit Coordinates (4cfn.pdb1.gz) 188 Kb
  • Biological Unit Coordinates (4cfn.pdb2.gz) 188 Kb
  • LPC: Ligand-Protein Contacts for 4CFN
  • CSU: Contacts of Structural Units for 4CFN
  • Structure Factors (1313 Kb)
  • Retrieve 4CFN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4CFN from S2C, [Save to disk]
  • Re-refined 4cfn structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4CFN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4CFN
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4CFN, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4cfn] [4cfn_B] [4cfn_D] [4cfn_C] [4cfn_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4CFN: [CYCLIN] [Cyclin_C] [S_TKc ] by SMART
    • Other resources with information on 4CFN
  • Community annotation for 4CFN at PDBWiki (http://pdbwiki.org)

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