4DGH Structure of SulP Transporter STAS Domain from Vibrio Cholerae Refined to 1.9 Angstrom Resolution date 2012-01-25
authors Keller, J.P., Chang, C., Marshall, N., Bearden, J., Dallos, P., Joachimiak, A., MCSG, Midwest.Center.for.Structural.Genomics.
compound source
symmetry
R_factor
R_Free 0.23601
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.90
ligand GOL, IOD, K, MSE enzyme
Gene VC
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (99 Kb) [Save to disk]
  • Biological Unit Coordinates (4dgh.pdb1.gz) 187 Kb
  • Biological Unit Coordinates (4dgh.pdb2.gz) 181 Kb
  • Biological Unit Coordinates (4dgh.pdb3.gz) 366 Kb
  • LPC: Ligand-Protein Contacts for 4DGH
  • CSU: Contacts of Structural Units for 4DGH
  • Structure Factors (917 Kb)
  • Retrieve 4DGH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4DGH from S2C, [Save to disk]
  • Re-refined 4dgh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4DGH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4DGH
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4DGH, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4dgh_A] [4dgh] [4dgh_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4DGH
  • Community annotation for 4DGH at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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