4ESF Crystal structure of PadR-like transcriptional regulator (BCE3449) from Bacillus cereus strain ATCC 10987 date 2012-04-23
authors Fibriansah, G., Kovacs, A.T., Kuipers, O.P., Thunnissen, A.M.W.H.
compound source
symmetry
R_factor
R_Free 0.2770
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.20
Gene BCE
Primary referenceCrystal Structures of Two Transcriptional Regulators from Bacillus cereus Define the Conserved Structural Features of a PadR Subfamily., Fibriansah G, Kovacs AT, Pool TJ, Boonstra M, Kuipers OP, Thunnissen AM, PLoS One. 2012;7(11):e48015. doi: 10.1371/journal.pone.0048015. Epub 2012 Nov 26. PMID:23189126
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (40 Kb) [Save to disk]
  • Biological Unit Coordinates (4esf.pdb1.gz) 69 Kb
  • CSU: Contacts of Structural Units for 4ESF
  • Structure Factors (216 Kb)
  • Retrieve 4ESF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4ESF from S2C, [Save to disk]
  • Re-refined 4esf structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4ESF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4ESF
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4ESF, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4esf_A] [4esf]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4ESF
  • Community annotation for 4ESF at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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