4F9F date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand GDP, GLC enzyme
Gene
Ontology
ChainFunctionProcessComponent
E, C, A, D, B, F


Primary referenceMechanistic Insights into Validoxylamine A 7'-Phosphate Synthesis by VldE Using the Structure of the Entire Product Complex., Cavalier MC, Yim YS, Asamizu S, Neau D, Almabruk KH, Mahmud T, Lee YH, PLoS One. 2012;7(9):e44934. doi: 10.1371/journal.pone.0044934. Epub 2012 Sep 13. PMID:23028689
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (448 Kb) [Save to disk]
  • Biological Unit Coordinates (4f9f.pdb1.gz) 151 Kb
  • Biological Unit Coordinates (4f9f.pdb2.gz) 149 Kb
  • Biological Unit Coordinates (4f9f.pdb3.gz) 151 Kb
  • LPC: Ligand-Protein Contacts for 4F9F
  • CSU: Contacts of Structural Units for 4F9F
  • Structure Factors (1351 Kb)
  • Retrieve 4F9F in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4F9F from S2C, [Save to disk]
  • Re-refined 4f9f structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4F9F in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4f9f] [4f9f_A] [4f9f_B] [4f9f_C] [4f9f_D] [4f9f_E] [4f9f_F]
  • SWISS-PROT database:

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science