4FOB Crystal structure of human anaplastic lymphoma kinase in complex with acyliminobenzimidazole inhibitor 1 date 2012-06-20
authors Whittington, D.A., Epstein, L.F., Chen, H.
compound source
symmetry
R_factor
R_Free 0.2549
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.90
ligand 0US enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe discovery and optimization of a novel class of potent, selective and orally bioavailable Anaplastic Lymphoma Kinase (ALK) Inhibitors with potential utility for the treatment of cancer., Lewis RT, Bode CM, Choquette D, Potashman M, Romero K, Stellwagen JC, Teffera Y, Moore E, Whittington DA, Chen H, Epstein LF, Emkey R, Andrews PS, Yu V, Saffran DC, Xu M, Drew AE, Merkel P, Szilvassy S, Brake RL, J Med Chem. 2012 Jun 26. PMID:22734674
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (56 Kb) [Save to disk]
  • Biological Unit Coordinates (4fob.pdb1.gz) 51 Kb
  • LPC: Ligand-Protein Contacts for 4FOB
  • CSU: Contacts of Structural Units for 4FOB
  • Structure Factors (593 Kb)
  • Retrieve 4FOB in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4FOB from S2C, [Save to disk]
  • Re-refined 4fob structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4FOB in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4FOB
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4FOB, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4fob_A] [4fob]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4FOB: [TyrKc ] by SMART
  • Other resources with information on 4FOB
  • Community annotation for 4FOB at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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