4FQE KdgM porin date
authors Hutter, C., Peneff, C.M., Wirth, C., Schirmer, T.
compound source
symmetry
R_factor
R_Free 0.248
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.93
ligand C8E, OCT enzyme
Gene DDA3937
Gene
Ontology
ChainFunctionProcessComponent
A
  • voltage-gated ion channel ac...
  • porin activity


    • Primary referenceStructure of the oligogalacturonate-specific KdgM porin., Hutter CA, Lehner R, Wirth Ch, Condemine G, Peneff C, Schirmer T, Acta Crystallogr D Biol Crystallogr. 2014 Jun;70(Pt 6):1770-8. doi:, 10.1107/S1399004714007147. Epub 2014 May 30. PMID:24914987
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (71 Kb) [Save to disk]
  • Biological Unit Coordinates (4fqe.pdb1.gz) 65 Kb
  • LPC: Ligand-Protein Contacts for 4FQE
  • CSU: Contacts of Structural Units for 4FQE
  • Structure Factors (113 Kb)
  • Retrieve 4FQE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4FQE from S2C, [Save to disk]
  • Re-refined 4fqe structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4FQE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4FQE
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4FQE, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4fqe] [4fqe_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4FQE
  • Community annotation for 4FQE at PDBWiki (http://pdbwiki.org)

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