4GA7 Crystal structure of human serpinB1 mutant date 2012-07-25
authors Wang, L., Li, Q., Wu, L., Zhang, K., Tong, L., Sun, F., Fan, Z.
compound source
symmetry
R_factor
R_Free 0.23202
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.90
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceIdentification of SERPINB1 As a Physiological Inhibitor of Human Granzyme H., Wang L, Li Q, Wu L, Liu S, Zhang Y, Yang X, Zhu P, Zhang H, Zhang K, Lou J, Liu P, Tong L, Sun F, Fan Z, J Immunol. 2012 Dec 26. PMID:23269243
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (245 Kb) [Save to disk]
  • Biological Unit Coordinates (4ga7.pdb1.gz) 121 Kb
  • Biological Unit Coordinates (4ga7.pdb2.gz) 122 Kb
  • CSU: Contacts of Structural Units for 4GA7
  • Structure Factors (254 Kb)
  • Retrieve 4GA7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4GA7 from S2C, [Save to disk]
  • Re-refined 4ga7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4GA7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4GA7
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4GA7, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ga7_B] [4ga7_A] [4ga7]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4GA7: [SERPIN ] by SMART
    • Other resources with information on 4GA7
  • Community annotation for 4GA7 at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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