4GX9	Crystal structure of a DNA polymerase III alpha-epsilon chimera	date
authors	Li, N., Horan, N., Xu, Z.Q., Jacques, D., Dixon, N.E., Oakley, A.J.
compound		source
symmetry		R_factor R_Free 0.29079
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	2.15
Gene Ontology	Chain Function Process Component A, D, C, B
Primary reference	Proofreading exonuclease on a tether: the complex between the E. coli DNA polymerase III subunits alpha, {varepsilon}, theta and beta reveals a highly flexible arrangement of the proofreading domain., Ozawa K, Horan NP, Robinson A, Yagi H, Hill FR, Jergic S, Xu ZQ, Loscha KV, Li N, Tehei M, Oakley AJ, Otting G, Huber T, Dixon NE, Nucleic Acids Res. 2013 Apr 10. PMID:23580545

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (204 Kb) [Save to disk] Biological Unit Coordinates (4gx9.pdb1.gz) 52 Kb Biological Unit Coordinates (4gx9.pdb2.gz) 51 Kb Biological Unit Coordinates (4gx9.pdb3.gz) 52 Kb Biological Unit Coordinates (4gx9.pdb4.gz) 52 Kb CSU: Contacts of Structural Units for 4GX9 Structure Factors (983 Kb) Retrieve 4GX9 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4GX9 from S2C, [Save to disk] Re-refined 4gx9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4GX9 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4GX9

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4GX9, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4gx9_A] [4gx9] [4gx9_B] [4gx9_D] [4gx9_C] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 4GX9: [POLIIIAc ] by SMART

Other resources with information on 4GX9

Community annotation for 4GX9 at PDBWiki (http://pdbwiki.org)

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---