4HJU Transthyretin in complex with (E)-N-(3-(4-hydroxy-3,5-dimethylstyryl)phenyl)acrylamide date 2012-10-14
authors Connelly, S., Wilson, I.A.
compound source
symmetry
R_factor
R_Free 0.1878
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.35
ligand 16L enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • hormone activity


    • Primary referenceStilbene vinyl sulfonamides as fluorogenic sensors of and traceless covalent kinetic stabilizers of transthyretin that prevent amyloidogenesis., Suh EH, Liu Y, Connelly S, Genereux JC, Wilson IA, Kelly JW, J Am Chem Soc. 2013 Nov 27;135(47):17869-80. doi: 10.1021/ja408230k. Epub 2013, Nov 18. PMID:24180271
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (92 Kb) [Save to disk]
  • Biological Unit Coordinates (4hju.pdb1.gz) 172 Kb
  • LPC: Ligand-Protein Contacts for 4HJU
  • CSU: Contacts of Structural Units for 4HJU
  • Structure Factors (1077 Kb)
  • Retrieve 4HJU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4HJU from S2C, [Save to disk]
  • Re-refined 4hju structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4HJU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4HJU
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4HJU, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4hju_A] [4hju] [4hju_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4HJU: [TR_THY ] by SMART
    • Other resources with information on 4HJU
  • Community annotation for 4HJU at PDBWiki (http://pdbwiki.org)

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science