4HLW Targeting the Binding Function 3 (BF3) Site of the Human Androgen Receptor Through Virtual Screening. 2. Development of 2-((2-phenoxyethyl) thio)-1H-benzoimidazole derivatives. date 2012-10-17
authors Ravi, S.N.M., Leblanc, E., Axerio-Cilies, P., Labriere, C., Frewin, K., Hassona, M.D.H., Lack, N.A., Han, F.Q., Guns, E.S., Young, R., Ban, F., Rennie, P.S., Cherkasov, A.
compound source
symmetry
R_factor
R_Free 0.2388
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.50
ligand 17W, GOL, SO4, TES BindingDB enzyme
Primary referenceTargeting the Binding Function 3 (BF3) Site of the Androgen Receptor Through Virtual Screening. 2. Development of 2-((2-phenoxyethyl) thio)-1H-benzimidazole Derivatives., Munuganti RS, Leblanc E, Axerio-Cilies P, Labriere C, Frewin K, Singh K, Hassona MD, Lack NA, Li H, Ban F, Tomlinson Guns E, Young R, Rennie PS, Cherkasov A, J Med Chem. 2013 Jan 18. PMID:23301637
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (87 Kb) [Save to disk]
  • Biological Unit Coordinates (4hlw.pdb1.gz) 82 Kb
  • LPC: Ligand-Protein Contacts for 4HLW
  • CSU: Contacts of Structural Units for 4HLW
  • Structure Factors (144 Kb)
  • Retrieve 4HLW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4HLW from S2C, [Save to disk]
  • Re-refined 4hlw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4HLW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4HLW
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4HLW, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4hlw] [4hlw_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4HLW: [HOLI ] by SMART
    • Other resources with information on 4HLW
  • Community annotation for 4HLW at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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