4HWR Crystal structure of E. coli Threonyl-tRNA synthetase bound to a novel inhibitor date 2012-11-08
authors Hilgers, M.T.
compound source
symmetry
R_factor
R_Free 0.3033
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.90
ligand 1B2, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceIdentification of bacteria-selective threonyl-tRNA synthetase substrate inhibitors by structure-based design., Teng M, Hilgers MT, Cunningham ML, Borchardt A, Locke JB, Abraham S, Haley G, Kwan BP, Hall C, Hough GW, Shaw KJ, Finn J, J Med Chem. 2013 Feb 28;56(4):1748-60. doi: 10.1021/jm301756m. Epub 2013 Feb 12. PMID:23362938
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (276 Kb) [Save to disk]
  • Biological Unit Coordinates (4hwr.pdb1.gz) 267 Kb
  • LPC: Ligand-Protein Contacts for 4HWR
  • CSU: Contacts of Structural Units for 4HWR
  • Structure Factors (1475 Kb)
  • Retrieve 4HWR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4HWR from S2C, [Save to disk]
  • Re-refined 4hwr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4HWR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4HWR
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4HWR, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4hwr_B] [4hwr] [4hwr_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4HWR
  • Community annotation for 4HWR at PDBWiki (http://pdbwiki.org)

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