4HYI X-RAY Crystal structure of compound 40 bound to human chk1 kinase domain date
authors Fischmann, T.O.
compound source
symmetry
R_factor
R_Free 0.202
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.40
ligand 1AO, GOL enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure-based design and optimization of 2-aminothiazole-4-carboxamide as a new class of CHK1 inhibitors., Huang X, Cheng CC, Fischmann TO, Duca JS, Richards M, Tadikonda PK, Reddy PA, Zhao L, Arshad Siddiqui M, Parry D, Davis N, Seghezzi W, Wiswell D, Shipps GW Jr, Bioorg Med Chem Lett. 2013 May 1;23(9):2590-4. doi: 10.1016/j.bmcl.2013.02.108., Epub 2013 Mar 7. PMID:23535330
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (55 Kb) [Save to disk]
  • Biological Unit Coordinates (4hyi.pdb1.gz) 51 Kb
  • LPC: Ligand-Protein Contacts for 4HYI
  • CSU: Contacts of Structural Units for 4HYI
  • Structure Factors (440 Kb)
  • Retrieve 4HYI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4HYI from S2C, [Save to disk]
  • Re-refined 4hyi structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4HYI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4HYI
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4HYI, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4hyi_A] [4hyi]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4HYI: [S_TKc ] by SMART
    • Other resources with information on 4HYI
  • Community annotation for 4HYI at PDBWiki (http://pdbwiki.org)

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