4HYS Crystal structure of JNK1 in complex with JIP1 peptide and 4-(4-Indazol-1-yl-pyrimidin-2-ylamino)-cyclohexan date 2012-11-14
authors Kuglstatter, A., Janson, C.
compound source
symmetry
R_factor
R_Free 0.29492
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.42
ligand 1BJ enzyme
Gene HCG
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceDevelopment of amino-pyrimidine inhibitors of c-Jun N-terminal kinase (JNK): kinase profiling guided optimization of a 1,2,3-benzotriazole lead., Palmer WS, Alam M, Arzeno HB, Chang KC, Dunn JP, Goldstein DM, Gong L, Goyal B, Hermann JC, Hogg JH, Hsieh G, Jahangir A, Janson C, Jin S, Ursula Kammlott R, Kuglstatter A, Lukacs C, Michoud C, Niu L, Reuter DC, Shao A, Silva T, Trejo-Martin TA, Stein K, Tan YC, Tivitmahaisoon P, Tran P, Wagner P, Weller P, Wu SY, Bioorg Med Chem Lett. 2013 Mar 1;23(5):1486-92. doi: 10.1016/j.bmcl.2012.12.047. , Epub 2012 Dec 22. PMID:23352510
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (113 Kb) [Save to disk]
  • Biological Unit Coordinates (4hys.pdb1.gz) 108 Kb
  • LPC: Ligand-Protein Contacts for 4HYS
  • CSU: Contacts of Structural Units for 4HYS
  • Structure Factors (205 Kb)
  • Retrieve 4HYS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4HYS from S2C, [Save to disk]
  • Re-refined 4hys structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4HYS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4HYS
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4HYS, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4hys_A] [4hys] [4hys_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4HYS: [S_TKc ] by SMART
  • Other resources with information on 4HYS
  • Community annotation for 4HYS at PDBWiki (http://pdbwiki.org)

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