4I8B Crystal Structure of Thioredoxin from Schistosoma Japonicum date 2012-12-03
authors Wu, Q., Peng, Y., Zhao, J., Li, X., Fan, X., Zhou, X., Chen, J., Luo, Z., Shi, D.
compound source
symmetry
R_factor
R_Free 0.2157
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.00
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • protein disulfide oxidoreduc...


    • Primary referenceExpression, characterization and crystal structure of thioredoxin from Schistosoma japonicum., Li Y, Li P, Peng Y, Wu Q, Huang F, Liu X, Li X, Zhou H, Guo D, Shi D, Zhou XN, Fan X, Parasitology. 2015 Mar 26:1-9. PMID:25810021
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (77 Kb) [Save to disk]
  • Biological Unit Coordinates (4i8b.pdb1.gz) 73 Kb
  • CSU: Contacts of Structural Units for 4I8B
  • Structure Factors (251 Kb)
  • Retrieve 4I8B in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4I8B from S2C, [Save to disk]
  • Re-refined 4i8b structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4I8B in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4I8B
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4I8B, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4i8b_B] [4i8b_A] [4i8b]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4I8B
  • Community annotation for 4I8B at PDBWiki (http://pdbwiki.org)

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