4I8N CRYSTAL STRUCTURE of PROTEIN TYROSINE PHOSPHATASE 1B IN COMPLEX WITH AN INHIBITOR [(4-{(2S)-2-(1,3-BENZOXAZOL-2-YL)-2-[(4-FLUOROPHENYL)SULFAMOYL]ETHYL}PHENYL)AMINO](OXO)ACETIC ACID date 2012-12-03
authors Reddy, S.M.V.V.V., Rao, K.N., Subramanya, H.
compound source
symmetry
R_factor
R_Free 0.24753
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.50
ligand 1CG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceX-Ray Structure of PTP1B in Complex with a New PTP1B Inhibitor., Reddy MV, Ghadiyaram C, Panigrahi SK, Krishnamurthy NR, Hosahalli S, Chandrasekharappa AP, Manna D, Badiger SE, Dubey PK, Mangamoori LN, Protein Pept Lett. 2014;21(1):90-3. PMID:23964742
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (56 Kb) [Save to disk]
  • Biological Unit Coordinates (4i8n.pdb1.gz) 50 Kb
  • LPC: Ligand-Protein Contacts for 4I8N
  • CSU: Contacts of Structural Units for 4I8N
  • Structure Factors (229 Kb)
  • Retrieve 4I8N in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4I8N from S2C, [Save to disk]
  • Re-refined 4i8n structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4I8N in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4I8N
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4I8N, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4i8n] [4i8n_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4I8N: [PTPc] [PTPc_DSPc ] by SMART
  • Other resources with information on 4I8N
  • Community annotation for 4I8N at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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