4IC4 Crystal structure of Osh3 ORD from Saccharomyces cerevisiae date 2012-12-09
authors Tong, J., Im, Y.J.
compound source
symmetry
R_factor
R_Free 0.234
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.50
Primary referenceStructure of osh3 reveals a conserved mode of phosphoinositide binding in oxysterol-binding proteins., Tong J, Yang H, Yang H, Eom SH, Im YJ, Structure. 2013 Jul 2;21(7):1203-13. doi: 10.1016/j.str.2013.05.007. Epub 2013, Jun 20. PMID:23791945
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (70 Kb) [Save to disk]
  • Biological Unit Coordinates (4ic4.pdb1.gz) 66 Kb
  • CSU: Contacts of Structural Units for 4IC4
  • Structure Factors (400 Kb)
  • Retrieve 4IC4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4IC4 from S2C, [Save to disk]
  • Re-refined 4ic4 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4IC4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4IC4
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4IC4, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ic4] [4ic4_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4IC4
  • Community annotation for 4IC4 at PDBWiki (http://pdbwiki.org)

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