4II9	Crystal structure of Weissella viridescens FemXVv non-ribosomal amino acid transferase in complex with a peptidyl-RNA conjugate	date	2012-12-20
authors	Sierra-Gallay, I.Li.de.la., Fonvielle, M., Tilbeurgh, H.van., Arthur, M., Etheve-Quelquejeu, M.
compound		source
symmetry		R_factor R_Free 0.20935
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	1.66
ligand	A9Z, DAL, FGA, GOL, MUB, UDP	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	The Structure of FemX in Complex with a Peptidyl-RNA Conjugate: Mechanism of Aminoacyl Transfer from Ala-tRNA to Peptidoglycan Precursors., Fonvielle M, Li de La Sierra-Gallay I, El-Sagheer AH, Lecerf M, Patin D, Mellal D, Mayer C, Blanot D, Gale N, Brown T, van Tilbeurgh H, Etheve-Quelquejeu M, Arthur M, Angew Chem Int Ed Engl. 2013 Jun 6. doi: 10.1002/anie.201301411. PMID:23744707

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (68 Kb) [Save to disk] Biological Unit Coordinates (4ii9.pdb1.gz) 62 Kb LPC: Ligand-Protein Contacts for 4II9 CSU: Contacts of Structural Units for 4II9 Structure Factors (516 Kb) Retrieve 4II9 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4II9 from S2C, [Save to disk] Re-refined 4ii9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4II9 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4II9

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4II9, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4ii9_A] [4ii9_C] [4ii9_B] [4ii9] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 4II9

Community annotation for 4II9 at PDBWiki (http://pdbwiki.org)

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