4IJK	Oxidoreductase	date	Dec 21, 2012
title	Crystal Structure Of A Putative 3-Oxoacyl-[Acyl-Carrier Protein]Reductase From Helicobacter Pylori 26695
authors	J.Hou, T.Osinski, H.Zheng, I.Shumilin, I.G.Shabalin, S.Shatsman, W.F.Anderson, W.Minor, Center For Structural Genomics Of Infe Diseases (Csgid)
compound		source
Molecule: 3-Ketoacyl-Acyl Carrier Protein Reductase (Fabg) Chain: A, B, C, D Ec: 1.1.1.100 Engineered: Yes		Organism_scientific: Helicobacter Pylori Organism_taxid: 85962 Strain: Atcc 700392 26695 Gene: Hp0561, Hp_0561 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21-Codonplus(De3)-Ril Expression_system_vector_type: Plasmid Expression_system_plasmid: Pmcsg7
symmetry	Space Group: P 21 21 2	R_factor 0.235 R_Free 0.272
crystal cell	length a length b length c angle alpha angle beta angle gamma 127.168 114.642 69.501 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.54 Å
ligand	NA	enzyme	Oxidoreductase E.C.1.1.1.100 BRENDA
Gene	HP
Gene Ontology	Chain Function Process Component A, D, C, B

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (279 Kb) [Save to disk] Biological Unit Coordinates (4ijk.pdb1.gz) 271 Kb LPC: Ligand-Protein Contacts for 4IJK CSU: Contacts of Structural Units for 4IJK Structure Factors (815 Kb) Retrieve 4IJK in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4IJK from S2C, [Save to disk] Re-refined 4ijk structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4IJK in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4IJK

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4IJK, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4ijk_C] [4ijk_A] [4ijk_B] [4ijk_D] [4ijk] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 4IJK

Community annotation for 4IJK at PDBWiki (http://pdbwiki.org)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---