4INX Structure of Pheromone-binding protein 1 in complex with (Z,Z)-11,13- hexadecadienol date
authors Luccio, E.di., Wilson, D.K.
compound source
symmetry
R_factor
R_Free 0.2138
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.85
ligand 1EX enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystallographic Observation of pH-Induced Conformational Changes in the Amyelois transitella Pheromone-Binding Protein AtraPBP1., di Luccio E, Ishida Y, Leal WS, Wilson DK, PLoS One. 2013;8(2):e53840. doi: 10.1371/journal.pone.0053840. Epub 2013 Feb 13. PMID:23418423
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (31 Kb) [Save to disk]
  • Biological Unit Coordinates (4inx.pdb1.gz) 26 Kb
  • LPC: Ligand-Protein Contacts for 4INX
  • CSU: Contacts of Structural Units for 4INX
  • Structure Factors (217 Kb)
  • Retrieve 4INX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4INX from S2C, [Save to disk]
  • Re-refined 4inx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4INX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4INX
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4INX, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4inx] [4inx_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4INX: [PhBP ] by SMART
  • Other resources with information on 4INX
  • Community annotation for 4INX at PDBWiki (http://pdbwiki.org)

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