4IUF	Crystal Structure of Human TDP-43 RRM1 Domain in Complex with a Single-stranded DNA	date	2013-01-21
authors	Kuo, P.H., Doudeva, L.G., Wang, Y.T., Yang, W.Z., Yuan, H.S.
compound		source
symmetry		R_factor R_Free 0.2586
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	2.75
ligand	XUA	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	The crystal structure of TDP-43 RRM1-DNA complex reveals the specific recognition for UG- and TG-rich nucleic acids., Kuo PH, Chiang CH, Wang YT, Doudeva LG, Yuan HS, Nucleic Acids Res. 2014 Apr;42(7):4712-22. doi: 10.1093/nar/gkt1407. Epub 2014, Jan 23. PMID:24464995

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (53 Kb) [Save to disk] Biological Unit Coordinates (4iuf.pdb1.gz) 49 Kb LPC: Ligand-Protein Contacts for 4IUF CSU: Contacts of Structural Units for 4IUF Structure Factors (80 Kb) Retrieve 4IUF in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4IUF from S2C, [Save to disk] Re-refined 4iuf structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4IUF in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4IUF

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4IUF, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4iuf] [4iuf_A] [4iuf_B] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 4IUF: [RRM ] by SMART

Other resources with information on 4IUF

Community annotation for 4IUF at PDBWiki (http://pdbwiki.org)

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