4LOT C1s CUB2-CCP1-CCP2 date 2013-07-13
authors Wallis, R., Girija, U.Venkatraman., Moody, P.C.E., Marshall, J.E.
compound source
symmetry
R_factor
R_Free 0.2923
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.92
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural basis of the C1q/C1s interaction and its central role in assembly of the C1 complex of complement activation., Venkatraman Girija U, Gingras AR, Marshall JE, Panchal R, Sheikh MA, Gal P, Schwaeble WJ, Mitchell DA, Moody PC, Wallis R, Proc Natl Acad Sci U S A. 2013 Aug 20;110(34):13916-20. doi:, 10.1073/pnas.1311113110. Epub 2013 Aug 6. PMID:23922389
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (89 Kb) [Save to disk]
  • Biological Unit Coordinates (4lot.pdb1.gz) 85 Kb
  • CSU: Contacts of Structural Units for 4LOT
  • Structure Factors (494 Kb)
  • Retrieve 4LOT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4LOT from S2C, [Save to disk]
  • Re-refined 4lot structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4LOT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4LOT
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4LOT, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4lot] [4lot_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4LOT: [CCP] [CUB ] by SMART
    • Other resources with information on 4LOT
  • Community annotation for 4LOT at PDBWiki (http://pdbwiki.org)

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