4M5U 5-(4-FLUOROPHENYL)-3-HYDROXY-6-[4-(1H-1,2,3,4-TETRAZOL-5-YL)PHENYL]-1,2-DIHYDROPYRIDIN-2-ONE bound to influenza 2009 pH1N1 endonuclease date 2013-08-08
authors Bauman, J.D., Patel, D., Das, K., Arnold, E.
compound source
symmetry
R_factor
R_Free 0.2063
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.20
ligand 20F, MN, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referencePhenyl substituted 3-hydroxypyridin-2(1H)-ones: inhibitors of influenza A endonuclease., Parhi AK, Xiang A, Bauman JD, Patel D, Vijayan RS, Das K, Arnold E, Lavoie EJ, Bioorg Med Chem. 2013 Nov 1;21(21):6435-46. doi: 10.1016/j.bmc.2013.08.053. Epub , 2013 Sep 4. PMID:24055080
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (80 Kb) [Save to disk]
  • Biological Unit Coordinates (4m5u.pdb1.gz) 74 Kb
  • Biological Unit Coordinates (4m5u.pdb2.gz) 146 Kb
  • LPC: Ligand-Protein Contacts for 4M5U
  • CSU: Contacts of Structural Units for 4M5U
  • Structure Factors (157 Kb)
  • Retrieve 4M5U in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4M5U from S2C, [Save to disk]
  • Re-refined 4m5u structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4M5U in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4M5U
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4M5U, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4m5u_A] [4m5u]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4M5U
  • Community annotation for 4M5U at PDBWiki (http://pdbwiki.org)

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