4M7V Dihydrofolate reductase from Enterococcus faecalis complexed with NADP(H)and RAB-propyl date
authors Bourne, C.R.
compound source
symmetry
R_factor
R_Free 0.2662
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.30
ligand NAP, RAR enzyme
Gene EF
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe Structure and Competitive Substrate Inhibition of Dihydrofolate Reductase from Enterococcus faecalis Reveal Restrictions to Cofactor Docking., Bourne CR, Wakeham N, Webb N, Nammalwar B, Bunce RA, Berlin KD, Barrow WW, Biochemistry. 2014 Feb 25;53(7):1228-38. doi: 10.1021/bi401104t. Epub 2014 Feb, 11. PMID:24495113
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (38 Kb) [Save to disk]
  • Biological Unit Coordinates (4m7v.pdb1.gz) 32 Kb
  • LPC: Ligand-Protein Contacts for 4M7V
  • CSU: Contacts of Structural Units for 4M7V
  • Structure Factors (162 Kb)
  • Retrieve 4M7V in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4M7V from S2C, [Save to disk]
  • Re-refined 4m7v structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4M7V in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4M7V
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4M7V, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4m7v_A] [4m7v]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4M7V
  • Community annotation for 4M7V at PDBWiki (http://pdbwiki.org)

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