4M8Y		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	KGQ	enzyme
Gene Ontology	Chain Function Process Component B, A
Primary reference	GS-8374, a prototype phosphonate-containing inhibitor of HIV-1 protease, effectively inhibits protease mutants with amino acid insertions., Grantz Saskova K, Kozisek M, Stray K, de Jong D, Rezaova P, Brynda J, van Maarseveen NM, Nijhuis M, Cihlar T, Konvalinka J, J Virol. 2014 Mar;88(6):3586-90. doi: 10.1128/JVI.02688-13. Epub 2013 Dec 26. PMID:24371077

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (40 Kb) [Save to disk] Biological Unit Coordinates (4m8y.pdb1.gz) 35 Kb LPC: Ligand-Protein Contacts for 4M8Y CSU: Contacts of Structural Units for 4M8Y Structure Factors (169 Kb) Retrieve 4M8Y in mmCIF format [Save to disk] Re-refined 4m8y structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4M8Y in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4m8y] [4m8y_A] [4m8y_B] SWISS-PROT database:

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