4MA6 Crystal structure of Ara h 8 with Epicatechin bound date
authors Offermann, L.R., Hurlburt, B.K., Majorek, K.A., McBride, J.K., Maleki, S.J., Chruszcz, M.
compound source
symmetry
R_factor
R_Free 0.24768
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.00
ligand 28E, NA enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • protein phosphatase inhibito...


    • Primary referenceStructure and Function of the Peanut Panallergen Ara h 8., Hurlburt BK, Offermann LR, McBride JK, Majorek KA, Maleki SJ, Chruszcz M, J Biol Chem. 2013 Dec 27;288(52):36890-901. doi: 10.1074/jbc.M113.517797. Epub, 2013 Nov 19. PMID:24253038
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (109 Kb) [Save to disk]
  • Biological Unit Coordinates (4ma6.pdb1.gz) 53 Kb
  • Biological Unit Coordinates (4ma6.pdb2.gz) 51 Kb
  • LPC: Ligand-Protein Contacts for 4MA6
  • CSU: Contacts of Structural Units for 4MA6
  • Structure Factors (493 Kb)
  • Retrieve 4MA6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4MA6 from S2C, [Save to disk]
  • Re-refined 4ma6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4MA6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4MA6
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4MA6, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ma6_A] [4ma6_B] [4ma6]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4MA6
  • Community annotation for 4MA6 at PDBWiki (http://pdbwiki.org)

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