4MMA Crystal structure of LeuBAT (delta13 mutant) in complex with clomipramine date 2013-09-08
authors Wang, H., Gouaux, E.
compound source
symmetry
R_factor
R_Free 0.2609
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 3.30
ligand CXX, NA enzyme
Gene AQ
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural basis for action by diverse antidepressants on biogenic amine transporters., Wang H, Goehring A, Wang KH, Penmatsa A, Ressler R, Gouaux E, Nature. 2013 Nov 7;503(7474):141-5. doi: 10.1038/nature12648. Epub 2013 Oct 13. PMID:24121440
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (87 Kb) [Save to disk]
  • Biological Unit Coordinates (4mma.pdb1.gz) 82 Kb
  • LPC: Ligand-Protein Contacts for 4MMA
  • CSU: Contacts of Structural Units for 4MMA
  • Structure Factors (134 Kb)
  • Retrieve 4MMA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4MMA from S2C, [Save to disk]
  • Re-refined 4mma structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4MMA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4MMA
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4MMA, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4mma_A] [4mma]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4MMA
  • Community annotation for 4MMA at PDBWiki (http://pdbwiki.org)

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