4MPX Human beta-tryptase co-crystal structure with [(1,1,3,3-tetramethyldisiloxane-1,3-diyl)di-1-benzothiene-4,2-diyl]bis({4-[3-(aminomethyl)phenyl]piperidin-1-yl}methanone) date
authors White, A., Stein, A.J., Suto, R.
compound source
symmetry
R_factor
R_Free 0.2325
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.00
ligand 2AV, CL, MES, PGE, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (93 Kb) [Save to disk]
  • Biological Unit Coordinates (4mpx.pdb1.gz) 171 Kb
  • Biological Unit Coordinates (4mpx.pdb2.gz) 87 Kb
  • LPC: Ligand-Protein Contacts for 4MPX
  • CSU: Contacts of Structural Units for 4MPX
  • Structure Factors (592 Kb)
  • Retrieve 4MPX in mmCIF format [Save to disk]
  • Re-refined 4mpx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4MPX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4MPX
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4MPX, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4mpx_A] [4mpx_B] [4mpx]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4MPX: [Tryp_SPc ] by SMART
  • Other resources with information on 4MPX
  • Community annotation for 4MPX at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science