4MSP Crystal structure of human peptidyl-prolyl cis-trans isomerase FKBP22 (aka FKBP14) containing two EF-hand motifs date
authors Boudko, S.P., Ishikawa, Y., Bachinger, H.P.
compound source
symmetry
R_factor
R_Free 0.1998
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.90
ligand 1PE, CA, PGO enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • peptidyl-prolyl cis-trans is...


    • Primary referenceStructure of human peptidyl-prolyl cis-trans isomerase FKBP22 containing two EF-hand motifs., Boudko SP, Ishikawa Y, Nix J, Chapman MS, Bachinger HP, Protein Sci. 2014 Jan;23(1):67-75. doi: 10.1002/pro.2391. Epub 2013 Nov 25. PMID:24272907
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (143 Kb) [Save to disk]
  • Biological Unit Coordinates (4msp.pdb1.gz) 136 Kb
  • LPC: Ligand-Protein Contacts for 4MSP
  • CSU: Contacts of Structural Units for 4MSP
  • Structure Factors (265 Kb)
  • Retrieve 4MSP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4MSP from S2C, [Save to disk]
  • Re-refined 4msp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4MSP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4MSP
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4MSP, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4msp_A] [4msp_B] [4msp]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4MSP: [EFh ] by SMART
    • Other resources with information on 4MSP
  • Community annotation for 4MSP at PDBWiki (http://pdbwiki.org)

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