4MVA 1.43 Angstrom Resolution Crystal Structure of Triosephosphate Isomerase (tpiA) from Escherichia coli in Complex with Acetyl Phosphate. date
authors Minasov, G., Kuhn, M.L., Dubrovska, I., Winsor, J., Shuvalova, L., Grimshaw, S., Kwon, K., Anderson, W.F., CSGID, Center.for.Structural.Genomics.of.Infectious.Diseases.
compound source
symmetry
R_factor
R_Free 0.15614
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.43
ligand CL, EDO, PEG, PO4, UVW enzyme
Gene BWG
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructural, kinetic and proteomic characterization of acetyl phosphate-dependent bacterial protein acetylation., Kuhn ML, Zemaitaitis B, Hu LI, Sahu A, Sorensen D, Minasov G, Lima BP, Scholle M, Mrksich M, Anderson WF, Gibson BW, Schilling B, Wolfe AJ, PLoS One. 2014 Apr 22;9(4):e94816. doi: 10.1371/journal.pone.0094816. eCollection, 2014. PMID:24756028
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (192 Kb) [Save to disk]
  • Biological Unit Coordinates (4mva.pdb1.gz) 186 Kb
  • LPC: Ligand-Protein Contacts for 4MVA
  • CSU: Contacts of Structural Units for 4MVA
  • Structure Factors (1539 Kb)
  • Retrieve 4MVA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4MVA from S2C, [Save to disk]
  • Re-refined 4mva structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4MVA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4MVA
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4MVA, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4mva] [4mva_A] [4mva_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4MVA
  • Community annotation for 4MVA at PDBWiki (http://pdbwiki.org)

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