4N6Z Pim1 Complexed with a pyridylcarboxamide date 2013-10-14
authors Bellamacina, C.R., Le, V., Shu, W., Burger, M.T., Bussiere, D.
compound source
symmetry
R_factor
R_Free 0.1885
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.20
ligand 2HW, GOL, SEP enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure Guided Optimization, in Vitro Activity, and in Vivo Activity of Pan-PIM Kinase Inhibitors., Burger MT, Han W, Lan J, Nishiguchi G, Bellamacina C, Lindval M, Atallah G, Ding Y, Mathur M, McBride C, Beans EL, Muller K, Tamez V, Zhang Y, Huh K, Feucht P, Zavorotinskaya T, Dai Y, Holash J, Castillo J, Langowski J, Wang Y, Chen MY, Garcia PD, ACS Med Chem Lett. 2013 Oct 15;4(12):1193-7. doi: 10.1021/ml400307j. eCollection , 2013 Dec 12. PMID:24900629
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (104 Kb) [Save to disk]
  • Biological Unit Coordinates (4n6z.pdb1.gz) 99 Kb
  • LPC: Ligand-Protein Contacts for 4N6Z
  • CSU: Contacts of Structural Units for 4N6Z
  • Structure Factors (235 Kb)
  • Retrieve 4N6Z in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4N6Z from S2C, [Save to disk]
  • Re-refined 4n6z structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4N6Z in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4N6Z
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4N6Z, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4n6z_A] [4n6z]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4N6Z: [S_TKc ] by SMART
    • Other resources with information on 4N6Z
  • Community annotation for 4N6Z at PDBWiki (http://pdbwiki.org)

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