4N9C	Fragment-based Design of 3-Aminopyridine-derived Amides as Potent Inhibitors of Human Nicotinamide Phosphoribosyltransferase (NAMPT)	date	2013-10-20
authors	Dragovich, P.S., Zhao, G., Baumeister, T., Bravo, B., Giannetti, A.M., Ho, Y., Hua, R., Li, G., Liang, X., Brien, T.O., Skelton, N.J., Wang, C., Zhao, Q., Oh, A., Wang, W., Wang, Y., Xiao, Y., Yuen, P., Zak, M., Zheng, X.
compound		source
symmetry		R_factor R_Free 0.2010
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	1.75
ligand	2ZM, PO4	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	Fragment-based design of 3-aminopyridine-derived amides as potent inhibitors of human nicotinamide phosphoribosyltransferase (NAMPT)., Dragovich PS, Zhao G, Baumeister T, Bravo B, Giannetti AM, Ho YC, Hua R, Li G, Liang X, Ma X, O'Brien T, Oh A, Skelton NJ, Wang C, Wang W, Wang Y, Xiao Y, Yuen PW, Zak M, Zhao Q, Zheng X, Bioorg Med Chem Lett. 2014 Feb 1;24(3):954-62. doi: 10.1016/j.bmcl.2013.12.062., Epub 2013 Dec 21. PMID:24433859

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (341 Kb) [Save to disk] Biological Unit Coordinates (4n9c.pdb1.gz) 336 Kb LPC: Ligand-Protein Contacts for 4N9C CSU: Contacts of Structural Units for 4N9C Structure Factors (1399 Kb) Retrieve 4N9C in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4N9C from S2C, [Save to disk] Re-refined 4n9c structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4N9C in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4N9C

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4N9C, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4n9c_B] [4n9c_A] [4n9c] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 4N9C

Community annotation for 4N9C at PDBWiki (http://pdbwiki.org)

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