4NDV date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand BGC, GAL, GLA enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceAtomic-resolution Structure of the alpha-galactosyl binding Lyophyllum decastes lectin reveals a new protein family found in both fungi and plants., van Eerde A, Grahn EM, Winter HC, Goldstein IJ, Krengel U, Glycobiology. 2014 Dec 11. pii: cwu136. PMID:25504801
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (71 Kb) [Save to disk]
  • Biological Unit Coordinates (4ndv.pdb1.gz) 67 Kb
  • LPC: Ligand-Protein Contacts for 4NDV
  • CSU: Contacts of Structural Units for 4NDV
  • Structure Factors (272 Kb)
  • Retrieve 4NDV in mmCIF format [Save to disk]
  • Re-refined 4ndv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4NDV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ndv] [4ndv_A] [4ndv_B]
  • SWISS-PROT database:

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