4NL3 Crystal Structure of Listeria monocytogenes Hfq in complex with U6 RNA date
authors Kovach, A.R., Brennan, R.G.
compound source
symmetry
R_factor
R_Free 0.2827
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 3.10
Gene LMHCC
Gene
Ontology
ChainFunctionProcessComponent
F, A, J, K, E, B, H, C, D, I, G, L


Primary referenceRecognition of U-rich RNA by Hfq from the Gram-positive pathogen Listeria monocytogenes., Kovach AR, Hoff KE, Canty JT, Orans J, Brennan RG, RNA. 2014 Aug 22. PMID:25150227
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (147 Kb) [Save to disk]
  • Biological Unit Coordinates (4nl3.pdb1.gz) 71 Kb
  • Biological Unit Coordinates (4nl3.pdb2.gz) 72 Kb
  • CSU: Contacts of Structural Units for 4NL3
  • Structure Factors (252 Kb)
  • Retrieve 4NL3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4NL3 from S2C, [Save to disk]
  • Re-refined 4nl3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4NL3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4NL3
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4NL3, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4nl3_J] [4nl3_I] [4nl3_L] [4nl3_Z] [4nl3_D] [4nl3_R] [4nl3_K] [4nl3] [4nl3_E] [4nl3_G] [4nl3_C] [4nl3_A] [4nl3_F] [4nl3_B] [4nl3_H]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4NL3
  • Community annotation for 4NL3 at PDBWiki (http://pdbwiki.org)

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