4OV0 Structure of Bacteriorhdopsin Transferred from Amphipol A8-35 to a Lipidic Mesophase date
authors Polovinkin, V., Gushchin, I., Sintsov, M., Round, E., Balandin, T., Chervakov, P., Schevchenko, V., Utrobin, P., Popov, A., Borshchevskiy, V., Mishin, A., Kuklin, A., Willbold, D., Popot, J.L., Gordeliy, V.
compound source
symmetry
R_factor
R_Free 0.2090
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.00
ligand RET enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • ion channel activity


    • Primary referenceHigh-Resolution Structure of a Membrane Protein Transferred from Amphipol to a Lipidic Mesophase., Polovinkin V, Gushchin I, Sintsov M, Round E, Balandin T, Chervakov P, Schevchenko V, Utrobin P, Popov A, Borshchevskiy V, Mishin A, Kuklin A, Willbold D, Chupin V, Popot JL, Gordeliy V, J Membr Biol. 2014 Sep 6. PMID:25192977
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (39 Kb) [Save to disk]
  • Biological Unit Coordinates (4ov0.pdb1.gz) 101 Kb
  • LPC: Ligand-Protein Contacts for 4OV0
  • CSU: Contacts of Structural Units for 4OV0
  • Structure Factors (165 Kb)
  • Retrieve 4OV0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4OV0 from S2C, [Save to disk]
  • Re-refined 4ov0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4OV0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4OV0
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4OV0, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ov0_A] [4ov0]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4OV0: [Bac_rhodopsin ] by SMART
    • Other resources with information on 4OV0
  • Community annotation for 4OV0 at PDBWiki (http://pdbwiki.org)

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