4P16 Crystal structure of the papain-like protease of Middle-East Respiratory Syndrome coronavirus date
authors Lei, J., Mesters, J.R., Ma, Q., Hilgenfeld, R.
compound source
symmetry
R_factor
R_Free 0.2336
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.50
ligand CME, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure of the papain-like protease of MERS coronavirus reveals unusual, potentially druggable active-site features., Lei J, Mesters JR, Drosten C, Anemuller S, Ma Q, Hilgenfeld R, Antiviral Res. 2014 Jun 30;109C:72-82. doi: 10.1016/j.antiviral.2014.06.011. PMID:24992731
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (56 Kb) [Save to disk]
  • Biological Unit Coordinates (4p16.pdb1.gz) 101 Kb
  • LPC: Ligand-Protein Contacts for 4P16
  • CSU: Contacts of Structural Units for 4P16
  • Structure Factors (683 Kb)
  • Retrieve 4P16 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4P16 from S2C, [Save to disk]
  • Re-refined 4p16 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4P16 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4P16
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4P16, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4p16_A] [4p16]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4P16
  • Community annotation for 4P16 at PDBWiki (http://pdbwiki.org)

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