4PMF Human transthyretin (TTR) complexed with curcumin date
authors Stura, E.A., Ciccone, L.
compound source
symmetry
R_factor
R_Free 0.2088
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.35
ligand CUR, EDO, NA enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • hormone activity


  • Primary referenceTransthyretin complexes with curcumin and bromo-estradiol: evaluation of solubilizing multicomponent mixtures., Ciccone L, Tepshi L, Nencetti S, Stura EA, N Biotechnol. 2014 Sep 16. pii: S1871-6784(14)02165-7. doi:, 10.1016/j.nbt.2014.09.002. PMID:25224922
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (55 Kb) [Save to disk]
  • Biological Unit Coordinates (4pmf.pdb1.gz) 99 Kb
  • LPC: Ligand-Protein Contacts for 4PMF
  • CSU: Contacts of Structural Units for 4PMF
  • Structure Factors (879 Kb)
  • Retrieve 4PMF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4PMF from S2C, [Save to disk]
  • Re-refined 4pmf structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4PMF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4PMF
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4PMF, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4pmf_B] [4pmf_A] [4pmf]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4PMF: [TR_THY ] by SMART
  • Other resources with information on 4PMF
  • Community annotation for 4PMF at PDBWiki (http://pdbwiki.org)

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