4QTY Caspase-3 E190A date
authors Cade, C., Swartz, P.D., MacKenzie, S.H., Clark, A.C.
compound source
symmetry
R_factor
R_Free 0.1946
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.60
ligand 0QE, ACE, AZI, NA enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • phospholipase A2 activator a...


  • Primary referenceModifying Caspase-3 Activity by Altering Allosteric Networks., Cade C, Swartz P, MacKenzie SH, Clark AC, Biochemistry. 2014 Oct 24. PMID:25343534
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (51 Kb) [Save to disk]
  • Biological Unit Coordinates (4qty.pdb1.gz) 92 Kb
  • LPC: Ligand-Protein Contacts for 4QTY
  • CSU: Contacts of Structural Units for 4QTY
  • Structure Factors (381 Kb)
  • Retrieve 4QTY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4QTY from S2C, [Save to disk]
  • Re-refined 4qty structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4QTY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4QTY
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4QTY, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4qty] [4qty_F] [4qty_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4QTY: [CASc ] by SMART
  • Other resources with information on 4QTY
  • Community annotation for 4QTY at PDBWiki (http://pdbwiki.org)

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