4REF	Crystal Structure of TR3 LBD_L449W in complex with Molecule 2	date
authors	Li, F.W., Cai, Q.X., Li, A.Z., Tian, X.Y., Wang, W.J., Yuan, W., Hou, P.P., Wu, Q., Lin, T.W.
compound		source
symmetry		R_factor R_Free 0.22974
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	2.10
ligand	3N0, GOL	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	Induction of Autophagic Death in Cancer Cells by Agonizing TR3 and Attenuating Akt2 Activity., Wang WJ, Wang Y, Hou PP, Li FW, Zhou B, Chen HZ, Bian XL, Cai QX, Xing YZ, He JP, Zhang H, Huang PQ, Lin T, Wu Q, Chem Biol. 2015 Aug 20;22(8):1040-51. doi: 10.1016/j.chembiol.2015.06.023. Epub, 2015 Jul 30. PMID:26235054

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (85 Kb) [Save to disk] Biological Unit Coordinates (4ref.pdb1.gz) 41 Kb Biological Unit Coordinates (4ref.pdb2.gz) 41 Kb Biological Unit Coordinates (4ref.pdb3.gz) 79 Kb LPC: Ligand-Protein Contacts for 4REF CSU: Contacts of Structural Units for 4REF Structure Factors (701 Kb) Retrieve 4REF in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4REF from S2C, [Save to disk] Re-refined 4ref structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4REF in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4REF

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4ref_B] [4ref] [4ref_A] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 4REF: [HOLI ] by SMART

Other resources with information on 4REF

Community annotation for 4REF at PDBWiki (http://pdbwiki.org)

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