4TOY date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand PCA enzyme
Primary referenceBroad and potent HIV-1 neutralization by a human antibody that binds the gp41-gp120 interface., Huang J, Kang BH, Pancera M, Lee JH, Tong T, Feng Y, Georgiev IS, Chuang GY, Druz A, Doria-Rose NA, Laub L, Sliepen K, van Gils MJ, de la Pena AT, Derking R, Klasse PJ, Migueles SA, Bailer RT, Alam M, Pugach P, Haynes BF, Wyatt RT, Sanders RW, Binley JM, Ward AB, Mascola JR, Kwong PD, Connors M, Nature. 2014 Sep 3. doi: 10.1038/nature13601. PMID:25186731
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (224 Kb) [Save to disk]
  • Biological Unit Coordinates (4toy.pdb1.gz) 216 Kb
  • LPC: Ligand-Protein Contacts for 4TOY
  • CSU: Contacts of Structural Units for 4TOY
  • Structure Factors (1011 Kb)
  • Retrieve 4TOY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4TOY from S2C, [Save to disk]
  • Re-refined 4toy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4TOY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4toy] [4toy_H] [4toy_L]
  • SWISS-PROT database:
  • Domains found in 4TOY: [IG_like] [IGv ] by SMART

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