4U1D Structure of the PCI domain of translation initiation factor eIF3a date
authors Erzberger, J.P., Schaefer, T., Ban, N.
compound source
symmetry
R_factor
R_Free 0.2037
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 3.30
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Primary referenceMolecular Architecture of the 40SeIF1eIF3 Translation Initiation Complex., Erzberger JP, Stengel F, Pellarin R, Zhang S, Schaefer T, Aylett CH, Cimermancic P, Boehringer D, Sali A, Aebersold R, Ban N, Cell. 2014 Aug 28;158(5):1123-35. doi: 10.1016/j.cell.2014.07.044. PMID:25171412
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (477 Kb) [Save to disk]
  • Biological Unit Coordinates (4u1d.pdb1.gz) 158 Kb
  • Biological Unit Coordinates (4u1d.pdb2.gz) 158 Kb
  • Biological Unit Coordinates (4u1d.pdb3.gz) 162 Kb
  • CSU: Contacts of Structural Units for 4U1D
  • Structure Factors (425 Kb)
  • Retrieve 4U1D in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4U1D from S2C, [Save to disk]
  • Re-refined 4u1d structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4U1D in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4U1D
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4U1D, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4u1d] [4u1d_A] [4u1d_C] [4u1d_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4U1D: [PINT ] by SMART
    • Other resources with information on 4U1D
  • Community annotation for 4U1D at PDBWiki (http://pdbwiki.org)

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