4U4F Structure of GluA2* in complex with partial agonist (S)-5-Nitrowillardiine date
authors Yelshanskaya, M.V., Li, M., Sobolevsky, A.I.
compound source
symmetry
R_factor
R_Free 0.262
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 4.79
ligand NAG, NWD enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B
  • ion channel activity
  • extracellularly glutamate-ga...
  • ligand-gated ion channel act...
  • transmitter-gated ion channe...


  • Primary referenceStructure of an agonist-bound ionotropic glutamate receptor., Yelshanskaya MV, Li M, Sobolevsky AI, Science. 2014 Aug 7. pii: 1256508. PMID:25103407
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (442 Kb) [Save to disk]
  • Biological Unit Coordinates (4u4f.pdb1.gz) 434 Kb
  • LPC: Ligand-Protein Contacts for 4U4F
  • CSU: Contacts of Structural Units for 4U4F
  • Structure Factors (283 Kb)
  • Retrieve 4U4F in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4U4F from S2C, [Save to disk]
  • Re-refined 4u4f structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4U4F in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4U4F
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4U4F, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4u4f] [4u4f_B] [4u4f_A] [4u4f_C] [4u4f_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4U4F: [Lig_chan-Glu_bd] [PBPe ] by SMART
  • Other resources with information on 4U4F
  • Community annotation for 4U4F at PDBWiki (http://pdbwiki.org)

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