4W7T Crystal Structure of Hsp90-alpha N-domain Bound to the Inhibitor NVP-HSP990 date
authors Bellamacina, C.R., Shafer, C.M., Bussiere, D.
compound source
symmetry
R_factor
R_Free 0.210
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.80
ligand 3JC enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceDesign, Structure-Activity Relationship, and in Vivo Characterization of the Development Candidate NVP-HSP990., McBride CM, Levine B, Xia Y, Bellamacina C, Machajewski T, Gao Z, Renhowe P, Antonios-McCrea W, Barsanti P, Brinner K, Costales A, Doughan B, Lin X, Louie A, McKenna M, Mendenhall K, Poon D, Rico A, Wang M, Williams TE, Abrams T, Fong S, Hendrickson T, Lei D, Lin J, Menezes D, Pryer N, Taverna P, Xu Y, Zhou Y, Shafer CM, J Med Chem. 2014 Nov 13;57(21):9124-9. doi: 10.1021/jm501107q. Epub 2014 Nov 4. PMID:25368984
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (77 Kb) [Save to disk]
  • Biological Unit Coordinates (4w7t.pdb1.gz) 72 Kb
  • LPC: Ligand-Protein Contacts for 4W7T
  • CSU: Contacts of Structural Units for 4W7T
  • Structure Factors (267 Kb)
  • Retrieve 4W7T in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4W7T from S2C, [Save to disk]
  • Re-refined 4w7t structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4W7T in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4W7T
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4W7T, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4w7t] [4w7t_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4W7T: [HATPase_c ] by SMART
  • Other resources with information on 4W7T
  • Community annotation for 4W7T at PDBWiki (http://pdbwiki.org)

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